Dormanomics scRNA-seq Analysis

Single-cell transcriptomics for tissue-specific expression profiling in dormant species.
Supporting cell clustering, marker gene identification, and cell-cell communication analysis.

Back to All Workflows
Dormancy Focus: Cell cycle arrest (G0/G1), adipocyte browning trajectory, hypoxia-inducible states, and tissue-specific quiescence marker identification.
1
Cross-season Integration
Harmony/SCVI Batch Correction Active vs Torpor
2
Cell Cycle & Metabolic Scoring
Seurat G0 Arrest OXPHOS/Glycolysis
3
Trajectory Inference
Monocle3 Adipocyte Browing RNA Velocity
4
Cell-Cell Communication
CellChat Leptin/Adiponectin Seasonal LR Pairs
Recommended Tools
UMAP/PCA Violin Plot Cell Fate Flow RNA Velocity Heatmap